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Efficient Representation for Online Suffix Tree Construction

  • N. Jesper Larsson
    ,
  • Kasper Fuglsang
    ,
  • Kenneth Karlsson
Research Output:
Conference Article in Proceeding or Book/Report chapter
Article in proceedings
Peer-review

Open access

Publication Information

Output type

Research Output:
Conference Article in Proceeding or Book/Report chapter
Article in proceedings
Peer-review

Host publication Subtitle

13th International Symposium, SEA 2014

Original language

English

Pages from-to (Number of pages)

Pages 400-411 (12 pages)

Publication milestones

  • Published - 2014

Publication status

Published - 2014

Publisher

Springer, United States, Germany

Book series

  • Book series name: Lecture Notes in Computer Science
    Volume: 8504
    ISSN: 0302-9743
978-3-319-07958-5

ISBN (Electronic)

978-3-319-07959-2

Publication IDs

  • Scopus: 84903712857

Host publication title

Experimental Algorithms

Host publication editors

  • Joachim Gudmundsson
  • Jyrki Katajainen

Abstract

Suffix tree construction algorithms based on suffix links are popular because they are simple to implement, can operate online in linear time, and because the suffix links are often convenient for pattern matching. We present an approach using edge-oriented suffix links, which reduces the number of branch lookup operations (known to be a bottleneck in construction time) with some additional techniques to reduce construction cost. We discuss various effects of our approach and compare it to previous techniques. An experimental evaluation shows that we are able to reduce construction time to around half that of the original algorithm, and about two thirds that of previously known branch-reduced construction.

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Citations
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Captures
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Related Event

Title

Symposium on Experimental Algorithms 2014

Event type

Conference

Date

29/06/2014 - 01/07/2014

Location

CopenhagenDenmark