Efficient Representation for Online Suffix Tree Construction
- N. Jesper Larsson,
- Kasper Fuglsang,
- Kenneth Karlsson
Research Output:
Conference Article in Proceeding or Book/Report chapter
Article in proceedings
Peer-reviewOpen access
Publication Information
Output type
Research Output:
Conference Article in Proceeding or Book/Report chapter
Article in proceedings
Peer-reviewHost publication Subtitle
13th International Symposium, SEA 2014Original language
EnglishPages from-to (Number of pages)
Pages 400-411 (12 pages)Publication milestones
- Published - 2014
Publication status
Published - 2014
Publisher
Springer, United States, GermanyBook series
- Book series name: Lecture Notes in Computer Science
Volume: 8504
ISSN: 0302-9743
ISBN (Print)
978-3-319-07958-5ISBN (Electronic)
978-3-319-07959-2Publication IDs
- Scopus: 84903712857
Host publication title
Experimental AlgorithmsHost publication editors
- Joachim Gudmundsson
- Jyrki Katajainen
Abstract
Suffix tree construction algorithms based on suffix links are popular because they are simple to implement, can operate online in linear time, and because the suffix links are often convenient for pattern matching. We present an approach using edge-oriented suffix links, which reduces the number of branch lookup operations (known to be a bottleneck in construction time) with some additional techniques to reduce construction cost. We discuss various effects of our approach and compare it to previous techniques. An experimental evaluation shows that we are able to reduce construction time to around half that of the original algorithm, and about two thirds that of previously known branch-reduced construction.
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Related Event
Title
Symposium on Experimental Algorithms 2014
Event type
ConferenceDate
29/06/2014 - 01/07/2014Location
CopenhagenDenmark
